Multi-Fluorescence Imaging

for Protein Crystallization

Understand More About Your Crystals

Expand your understanding of your crystals by imaging in up to three different wavelengths, utilizing both ultraviolet (UV) and visible fluorescence imaging.

With UV & visible fluorescence imaging, it’s easy to find hidden protein crystals & discriminate them from salt, even protein with little-to-no tryptophan.


Detect Protein-Protein Complexes
Using fluorescent dyes and visible fluorescence imaging, you can differentiate between crystals of a protein-protein complex and crystals of a single protein.


96-well plates can quickly be imaged in about five minutes using visible fluorescence. UV imaging times vary based on tryptophan concentration but average about 10 minutes per plate.


See Greater Detail
With 3 automated objectives, you can zoom out to see the entire drop or zoom in to see your crystals in greater detail.

Sensitive Crystal Detection

Multi-Fluorescent Imaging (MFI) provides the flexibility to image in 3 different wavelengths of the user’s choosing including UV and visible fluorescence to easily detect protein crystals, even those buried under precipitate.


With UV imaging, drops are illuminated with UV light and the fluorescence generated from aromatic amino acids like tryptophan are detected to create an image.


By labeling only 0.1% of a sample with a fluorophore, visible fluorescence imaging provides the ability to detect proteins with little-to-no tryptophan. This technique acquires high contrast images in very short imaging times with no known sample damage.

Find Protein-Protein Complexes

With MFI, you can now differentiate between crystals of a protein-protein complex and crystals of just one protein. Simply, label the two proteins, or subunits, prior to crystallization with two different amine-reactive dyes and then image your drop at the two corresponding wavelengths. Crystals that fluoresce at both wavelengths are protein-protein complexes, whereas those that fluoresce at only one wavelength are of a single protein.

protein protein complex - multi-fluorescence imaging

Bovine pancreatic trypsin inhibitor (BPTI) labeled with Fluorescein and trypsin labeled with Texas Red.

Crystals fluoresce at both wavelengths indicating that they are the BPTI-trypsin complex.1

Image Using 3 Different Wavelengths of Your Choice

Choose up to 3 different light wavelengths to image your crystals, including ultraviolet and various visible light wavelengths. Interchangeable filter modules are used to maximize image quality and dye-label compatibility.

Designed for Image Quality

MFI’s optics are optimized for both UV and visible fluorescence imaging to provide high-contrast images. The UV LED and condenser lenses are positioned to maximize the intensity of the UV illumination in order to boost signal strength and produce quality UV images. For visible fluorescence imaging, individual filter cubes with dedicated LED light sources are used to maximize efficiency for each of the chosen wavelengths.

See More with High Magnification Objectives

With three objectives, you can zoom out to see the entire drop or zoom in to see your crystals in greater detail. All three objectives are located on a motorized wheel for quick and easy, automated selection and imaging. The table below provides the optical specifications for the different objectives.

ObjectiveNumerical ApertureDepth of Field (mm)Field of View (mm)Pixel Size (µL)
2.9x0.250.104.1 x 3.31.25
6.5x0.250.071.9 x 1.50.567
9.7x0.320.051.3 x 1.00.375
mfi zoom

Quick + Safe Labeling that Lasts

Simple 0.1% protein labeling protocol
1. Prepare a 5mM stock solution of a succinimidyl ester dye in DMSO.


2. Add appropriate amount of dye to protein solution for 0.1% labeling of lysine residues assuming a 1:1 stoichiometric labeling efficiency to amine residues.


3. Wait 5 minutes at which point 90% of the dye is bound.


There is no need for purification and samples are still fluorescent after 120 days. Protein labeling with fluorophores has been shown to have no known negative impact on crystallization and demonstrated as a useful method for positively identifying protein crystallization hits.2,3,4,5

Options to Fit your Needs + Budget

MFI is an option available in our ROCK IMAGER 2 benchtop imaging system, or in our ROCK IMAGER 1000 system with automated plate storage.

Both models can automatically image plates in visible light and up to 3 different wavelengths of your choosing.

rock imager mfi models